(N.B. a function is associated to the site as a whole, not to each metal within the site)
- Catalytic
When the metal ion is directly involved in the reaction mechanism of the enzyme.
- Redox
When the metal ion partecipates to the reaction mechanism by donating/accepting electron(s).
- Not Redox
When the metal ion participates to the reaction mechanism, but maintains its redox number throughout the reaction.
- Structural
when the metal ion stabilizes the 3D or higher-order structure of the macromolecule
it may aim to stabilize:
- The tertiary structure of a biomolecule
- The quaternary structure of a protein
- The complex interface of biomolecules
- Transport
When the metal ion binds other chemical species that are then transported together with it and eventually released.
- Electron Transfer
When the metal ion transports electrons.
- Regulatory
When the metal ion is involved in controlling the activity of the system or in the regulation of cellular processes.
it may control:
- Catalysis
When the binding of the metal ion enhances/inhibits the activity of an enzyme.
- Expression
When the binding of the metal ion induces/inhibits transcription.
- Substrate
When the metal ion is the target of the protein.
it may aim to:
- Sense the presence of the metal or of a metal-containing cofactor
- Trasport the metal or a metal-containing cofactor
- Store the metal or a metal-containing cofactor
- Degradate a metal-containing cofactor
- Biosynthesize a metal-containing cofactor
- Protection
when the metal ion has the aim of preserving and defending a molecule from adverse reactions